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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs35679667 chr7:64498368 C/A INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot
ACC rs35688290 chr1:245198698 T/TGA EFCAB2 chr1:245133007-245290466:+ 0.69 6.24 8.01E-8 Box Plot
ACC rs35700925 chr7:97473893 G/A TECPR1 chr7:97843936-97881563:- 0.7 5.28 2.53E-6 Box Plot
ACC rs35742188 chr17:62979083 C/T AMZ2P1 chr17:62962668-62971694:- 0.9 5.57 9.2E-7 Box Plot
ACC rs35762870 chr7:97405429 AT/A TECPR1 chr7:97843936-97881563:- 0.83 5.45 1.38E-6 Box Plot
ACC rs35808513 chr14:74320486 T/TC LIN52 chr14:74551499-74667938:+ 0.55 5.5 1.17E-6 Box Plot
ACC rs35816515 chr6:86220907 AT/A SNHG5 chr6:86370668-86388454:- 0.74 8.45 2.47E-11 Box Plot
ACC rs35857896 chr7:97330704 G/C SHFM1 chr7:96125596-96339203:- 0.81 5.05 5.75E-6 Box Plot
ACC rs35859453 chr14:64390302 C/A SYNE2 chr14:64319701-64693151:+ 1.01 5.25 2.85E-6 Box Plot
ACC rs35864336 chr14:74454195 C/T LIN52 chr14:74551499-74667938:+ 0.57 5.77 4.47E-7 Box Plot
ACC rs35867517 chr5:96265172 CT/C ERAP2 chr5:96211643-96255420:+ 0.98 12.02 1.24E-16 Box Plot
ACC rs35872360 chr11:74708165 GC/G XRRA1 chr11:74518784-74660245:- 0.7 5.81 3.81E-7 Box Plot
ACC rs35888445 chr1:63977172 T/C ITGB3BP chr1:63906441-64059392:- 0.62 6.66 1.71E-8 Box Plot
ACC rs35893260 chr8:71620073 C/T XKR9 chr8:71581600-71702606:+ 0.72 6.83 9.23E-9 Box Plot
ACC rs35898546 chr14:74293334 C/T LIN52 chr14:74551499-74667938:+ 0.49 5.34 2.11E-6 Box Plot